PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G201500.1.p
Common NamePRUPE_ppa009077mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 308aa    MW: 33992.6 Da    PI: 8.8245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G201500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.3e-11150197454
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  Prupe.4G201500.1.p 150 SKACREKLRRDRLNDKFLELGSILEPG---RPPKTDKAAILVDAVRMVNQL 197
                         5678**********************8...89***************9999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.294146197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.93E-8149202No hitNo description
PfamPF000109.7E-9150197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-12150219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-13151222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-9152203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd146860.00614212244No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MTKHTRKTHT TCCHQSPHHH QAHRFPLSLI PSEPTNPRTA KPFNCPLFGS EDITNSQPEN  60
PFFCLFRQRP NMVSPENTNW LFDYGLIDDA PVLDGNFPVS SSGFTWPVQP LAGSSSVSVE  120
IDGSLGDAEG VKESGSKKRV RTESCSGSSS KACREKLRRD RLNDKFLELG SILEPGRPPK  180
TDKAAILVDA VRMVNQLRGE AQKLKDSNSS LQEKIKELKA EKNELRDEKQ RLKLEKEKLE  240
QQLKAMNAQP GFLPPPPAIP AAFAAQGQAH GNKLVPFIGY PGVAMWQFMP PASVDTSQDH  300
VLRPPVA*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.35690.0fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894220.0KP689422.1 Prunus pseudocerasus isolate Unigene14053 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211667.10.0hypothetical protein PRUPE_ppa009077mg
SwissprotQ9FH371e-120ILR3_ARATH; Transcription factor ILR3
TrEMBLM5WHW10.0M5WHW1_PRUPE; Uncharacterized protein
STRINGVIT_19s0014g05100.t011e-134(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-89bHLH family protein